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Brownian motion in logarithmic potential
Berestneva, Ekaterina ; Ryabov, Artem (advisor) ; Chvosta, Petr (referee)
In this thesis we study first-passage properties of a Brownian particle diffusing under the action of logarithmic potential field U(x, t) = g(t) log(x). The main part of this thesis is de- voted to the case of time-dependent potential strength g(t). To obtain the corresponding survival probability, one may try to solve the Fokker-Planck equation. However, its exact solution for the time-dependent potential is yet unknown. In this work we propose a simple asymptotic theory which yields the long-time behaviour of the survival probability and the moments of the particle position. The survival probability exhibits a rather varied behaviour for different functions g(t). We identify three regimes of asymptotic decay: the regular regime, the marginal regime and the regime of enhanced absorption. We also address the question of how will the derived first-passage properties of Brownian motion change when the absorbing boundary is not exactly at the origin. 1
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Stochastic dynamics and energetics of biomolecular systems
Ryabov, Artem ; Chvosta, Petr (advisor) ; Novotný, Tomáš (referee) ; Papáček, Štěpán (referee)
Title: Stochastic dynamics and energetics of biomolecular systems Author: Artem Ryabov Department: Department of Macromolecular Physics Supervisor: prof. RNDr. Petr Chvosta, CSc., Department of Macromolecular Physics Abstract: The thesis comprises exactly solvable models from non-equilibrium statistical physics. First, we focus on a single-file diffusion, the diffusion of particles in narrow channel where particles cannot pass each other. After a brief review, we discuss open single-file systems with absorbing boundaries. Emphasis is put on an interplay of absorption process at the boundaries and inter-particle entropic repulsion and how these two aspects affect the dynam- ics of a given tagged particle. A starting point of the discussions is the exact distribution for the particle displacement derived by order-statistics argu- ments. The second part of the thesis is devoted to stochastic thermodynam- ics. In particular, we present an exactly solvable model, which describes a Brownian particle diffusing in a time-dependent anharmonic potential. The potential has a harmonic component with a time-dependent force constant and a time-independent repulsive logarithmic barrier at the origin. For a particular choice of the driving protocol, the exact work characteristic func- tion is obtained. An asymptotic analysis of...
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Brownian motion in logarithmic potential
Berestneva, Ekaterina ; Ryabov, Artem (advisor) ; Chvosta, Petr (referee)
In this thesis we study first-passage properties of a Brownian particle diffusing under the action of logarithmic potential field U(x, t) = g(t) log(x). The main part of this thesis is de- voted to the case of time-dependent potential strength g(t). To obtain the corresponding survival probability, one may try to solve the Fokker-Planck equation. However, its exact solution for the time-dependent potential is yet unknown. In this work we propose a simple asymptotic theory which yields the long-time behaviour of the survival probability and the moments of the particle position. The survival probability exhibits a rather varied behaviour for different functions g(t). We identify three regimes of asymptotic decay: the regular regime, the marginal regime and the regime of enhanced absorption. We also address the question of how will the derived first-passage properties of Brownian motion change when the absorbing boundary is not exactly at the origin. 1
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Stochastic dynamics and energetics of biomolecular systems
Ryabov, Artem ; Chvosta, Petr (advisor) ; Novotný, Tomáš (referee) ; Papáček, Štěpán (referee)
Title: Stochastic dynamics and energetics of biomolecular systems Author: Artem Ryabov Department: Department of Macromolecular Physics Supervisor: prof. RNDr. Petr Chvosta, CSc., Department of Macromolecular Physics Abstract: The thesis comprises exactly solvable models from non-equilibrium statistical physics. First, we focus on a single-file diffusion, the diffusion of particles in narrow channel where particles cannot pass each other. After a brief review, we discuss open single-file systems with absorbing boundaries. Emphasis is put on an interplay of absorption process at the boundaries and inter-particle entropic repulsion and how these two aspects affect the dynam- ics of a given tagged particle. A starting point of the discussions is the exact distribution for the particle displacement derived by order-statistics argu- ments. The second part of the thesis is devoted to stochastic thermodynam- ics. In particular, we present an exactly solvable model, which describes a Brownian particle diffusing in a time-dependent anharmonic potential. The potential has a harmonic component with a time-dependent force constant and a time-independent repulsive logarithmic barrier at the origin. For a particular choice of the driving protocol, the exact work characteristic func- tion is obtained. An asymptotic analysis of...
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